miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8799	+	6546	87	21.5	-22.7	NP_061505		5' arm      3' arm
8929	-	48741	87	21.5	-21.7	NP_061570		5' arm
8901	-	17550	89	21.5	-23.4	NP_061522		5' arm      3' arm
8886	-	5079	89	21.5	-21	NP_061502		5' arm      3' arm
8793	+	2442	90	21.5	-20.3	NP_061500		5' arm      3' arm
8841	+	30790	89	21.5	-24.3	NP_597918		5' arm      3' arm
8920	-	41295	89	21.5	-25	NP_061559		5' arm      3' arm
8880	-	3082	85	21.5	-22.9	NP_061500		5' arm      3' arm
8935	-	53958	89	21.5	-24.1	NP_061582		5' arm      3' arm
8807	+	11235	90	21.5	-23			5' arm      3' arm
8863	+	43298	87	21.5	-25.2	NP_061562		5' arm      3' arm
8852	+	36854	90	21.5	-22.6	NP_061549		5' arm      3' arm
8883	-	4329	89	21.5	-27.5	NP_061501		5' arm      3' arm
8872	+	53594	87	21.5	-19.9			5' arm      3' arm
8856	+	38980	90	21.5	-23.9	NP_061536		5' arm      3' arm
8819	+	16710	90	21	-20.4	NP_061522		5' arm      3' arm
8817	+	16325	84	21	-22.2	NP_061522		5' arm      3' arm
8895	-	13360	87	21	-22.6	NP_061516		5' arm      3' arm
8876	-	129	90	21	-23.7	NP_061497		5' arm      3' arm
8899	-	16995	88	21	-20.6	NP_061522		3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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