miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8903	-	17892	88	20	-24.5	NP_061522		5' arm      3' arm
8904	-	18576	90	22.5	-24.4	NP_061522		5' arm      3' arm
8839	+	29718	90	20	-24.4	NP_061536		5' arm      3' arm
8841	+	30790	89	21.5	-24.3	NP_597918		5' arm      3' arm
8922	-	43307	89	20	-24.2	NP_061562		5' arm      3' arm
8871	+	53327	88	20.5	-24.1			5' arm      3' arm
8907	-	26305	90	20	-24.1	NP_061528		5' arm      3' arm
8874	+	54295	87	23.5	-24.1	NP_061583		5' arm      3' arm
8818	+	16512	89	22	-24.1	NP_061522		5' arm      3' arm
8935	-	53958	89	21.5	-24.1	NP_061582		5' arm      3' arm
8856	+	38980	90	21.5	-23.9	NP_061536		5' arm      3' arm
8887	-	5278	90	22.5	-23.8	NP_061502		5' arm      3' arm
8876	-	129	90	21	-23.7	NP_061497		5' arm      3' arm
8924	-	45266	88	20.5	-23.7			5' arm      3' arm
8893	-	11517	87	22	-23.6	NP_061515		5' arm      3' arm
8933	-	52979	90	20	-23.5	NP_061580		5' arm      3' arm
8909	-	28733	88	20	-23.5	NP_061533		5' arm      3' arm
8833	+	27623	87	19.5	-23.4	NP_061531		5' arm      3' arm
8901	-	17550	89	21.5	-23.4	NP_061522		5' arm      3' arm
8830	+	25803	88	19.5	-23.2	NP_061527		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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