miRNA display CGI


Results 41 - 60 of 149 are showing below:
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GenBank Identifier RefSeq Acc. Name
9635581 NC_002484.1 Pseudomonas phage D3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8842 + 31426 89 19 -21.4 NP_061538 5' arm      3' arm
8789 + 799 90 22 -21.4 NP_061498 5' arm      3' arm
8794 + 2557 86 21 -21.5 NP_061500 5' arm      3' arm
8801 + 6793 90 20 -21.6 NP_061506 5' arm      3' arm
8854 + 37473 90 20.5 -21.6 NP_061549 5' arm      3' arm
8914 - 35329 89 20 -21.6 NP_061547       3' arm
8923 - 43979 90 22.5 -21.6 5' arm      
8822 + 17266 90 20 -21.7 NP_061522 5' arm      3' arm
8929 - 48741 87 21.5 -21.7 NP_061570 5' arm      
8844 + 32449 78 21 -21.7 5' arm      3' arm
8932 - 52152 78 20 -21.7 NP_061578 5' arm      3' arm
8921 - 43170 90 19 -21.9 NP_061562 5' arm      3' arm
8791 + 1438 87 19 -21.9 NP_061498 5' arm      3' arm
8936 - 55393 90 19.5 -21.9 NP_061587 5' arm      3' arm
8859 + 41976 89 20 -22 NP_061560 5' arm      3' arm
8788 + 427 78 20.5 -22.1 NP_061498 5' arm      3' arm
8821 + 16910 82 19.5 -22.2 NP_061522 5' arm      3' arm
8820 + 16801 87 19.5 -22.2 NP_061522 5' arm      3' arm
8817 + 16325 84 21 -22.2 NP_061522 5' arm      3' arm
8896 - 13446 86 19.5 -22.3 NP_061516 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.