miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8793	+	2442	90	21.5	-20.3	NP_061500		5' arm      3' arm
8826	+	19351	89	20.5	-20.4	NP_061523		5' arm      3' arm
8819	+	16710	90	21	-20.4	NP_061522		5' arm      3' arm
8894	-	13118	86	19.5	-20.5	NP_061516		5' arm      3' arm
8928	-	48643	90	19	-20.5	NP_061570		5' arm      3' arm
8899	-	16995	88	21	-20.6	NP_061522		3' arm
8919	-	40576	88	20.5	-20.6	NP_061558		5' arm      3' arm
8795	+	3055	89	24	-20.6	NP_061500		5' arm      3' arm
8878	-	2535	76	20	-20.7	NP_061500		5' arm      3' arm
8885	-	4950	90	19	-20.7	NP_061502		5' arm      3' arm
8806	+	10962	79	20	-21	NP_061514		5' arm      3' arm
8858	+	40263	90	22.5	-21	NP_061557		5' arm      3' arm
8886	-	5079	89	21.5	-21	NP_061502		5' arm      3' arm
8927	-	47868	85	20	-21	NP_061569		5' arm      3' arm
8881	-	3470	90	19	-21	NP_061500		5' arm      3' arm
8910	-	29072	88	20.5	-21.2	NP_061535		5' arm      3' arm
8812	+	12116	87	23.5	-21.2	NP_061515		5' arm      3' arm
8790	+	1128	89	21.5	-21.3	NP_061498		5' arm      3' arm
8870	+	51342	87	20	-21.3	NP_061576		5' arm      3' arm
8789	+	799	90	22	-21.4	NP_061498		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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