miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8858	+	40263	90	22.5	-21	NP_061557		5' arm      3' arm
8796	+	3599	89	22.5	-33.9	NP_061501		5' arm      3' arm
8849	+	34792	89	22.5	-22.6	NP_061546		5' arm      3' arm
8934	-	53533	84	22.5	-27.9			5' arm      3' arm
8887	-	5278	90	22.5	-23.8	NP_061502		5' arm      3' arm
8904	-	18576	90	22.5	-24.4	NP_061522		5' arm      3' arm
8931	-	51838	86	22	-25.3	NP_061578		5' arm      3' arm
8838	+	29444	87	22	-20	NP_061536		5' arm      3' arm
8789	+	799	90	22	-21.4	NP_061498		5' arm      3' arm
8828	+	20690	89	22	-19.6	NP_061523		5' arm      3' arm
8792	+	2185	90	22	-19.4	NP_061499		5' arm      3' arm
8900	-	17355	89	22	-22.9	NP_061522		5' arm      3' arm
8930	-	49613	86	22	-22.3	NP_061572		5' arm      3' arm
8818	+	16512	89	22	-24.1	NP_061522		5' arm      3' arm
8845	+	32555	87	22	-26	NP_061540		5' arm      3' arm
8893	-	11517	87	22	-23.6	NP_061515		5' arm      3' arm
8848	+	34039	88	22	-26.3	NP_061542		5' arm      3' arm
8803	+	7362	88	22	-27.4	NP_061507		5' arm      3' arm
8853	+	37366	88	22	-26.4	NP_061549		5' arm      3' arm
8856	+	38980	90	21.5	-23.9	NP_061536		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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