miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
9749	-	125083	90	23	-21.1	NP_066823		5' arm      3' arm
9763	-	137354	90	19.5	-25	NP_066903		5' arm      3' arm
9778	-	161462	89	20	-20.4	NP_066903		5' arm      3' arm
9751	-	126954	90	24	-22.5	NP_066822		5' arm      3' arm
9779	-	161624	89	21	-21.7	NP_066903		5' arm      3' arm
9724	-	58962	89	24	-24.8	NP_066859		5' arm      3' arm
9775	-	158417	84	24	-27	NP_066903		5' arm      3' arm
9728	-	72329	90	19.5	-19.4	NP_066864		5' arm      3' arm
9733	-	76833	90	19.5	-20.3	NP_066868		5' arm      3' arm
9735	-	92715	89	23	-20.6	NP_066872		5' arm      3' arm
9740	-	103662	87	22	-21	NP_066879		5' arm      3' arm
9744	-	122624	88	20.5	-28.4			5' arm      3' arm
9746	-	123401	87	20	-23.4	NP_066893		5' arm      3' arm
9754	-	128942	90	19.5	-22.66			5' arm      3' arm
9756	-	130443	89	23	-23.7	NP_066819		5' arm      3' arm
9759	-	134607	86	19	-20.9	NP_066917		5' arm      3' arm
9761	-	136588	88	23	-35.4	NP_066916		5' arm      3' arm
9767	-	140086	89	19.5	-20.1	NP_066903		5' arm      3' arm
9770	-	154729	89	24.5	-20			5' arm      3' arm
9777	-	159299	89	21	-20.3	NP_066916		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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