miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1156	+	4983	89	20	-19.4	NP_051718		5' arm      3' arm
1157	+	6955	87	20.5	-21.2	NP_051719		5' arm      3' arm
1155	+	4054	87	20	-24.2	NP_051876		5' arm      3' arm
1153	+	2165	90	20	-23.9	NP_051879		5' arm      3' arm
1154	+	3487	90	22.5	-28.2	NP_051877		5' arm      3' arm
1166	+	134626	90	22.5	-24.19	NP_051852		5' arm      3' arm
1167	+	136265	89	24	-27.6	NP_051854		5' arm      3' arm
1178	+	158529	90	21	-23.7	NP_051714		5' arm      3' arm
1180	+	159232	83	21.5	-24.9	NP_051879		5' arm      3' arm
1181	+	159519	90	25.5	-23.8	NP_051713		5' arm      3' arm
1176	+	156679	89	20	-19.6	NP_051874		5' arm      3' arm
1175	+	156536	86	20.5	-20.1	NP_051718		5' arm      3' arm
1174	+	153698	87	22	-23.8	NP_051872		5' arm      3' arm
1177	+	157144	86	22.5	-24.1	NP_051716		5' arm      3' arm
1173	+	151066	90	20	-25.2	NP_051870		5' arm      3' arm
1172	+	150945	85	24	-21	NP_051870		5' arm      3' arm
1171	+	150201	90	24	-24.79	NP_051869		5' arm      3' arm
1170	+	142342	89	22	-24.1	NP_051861		5' arm      3' arm
1168	+	136461	87	20.5	-23	NP_051854		5' arm      3' arm
1169	+	139762	89	23	-21.5	NP_051858		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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