miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1166	+	134626	90	22.5	-24.19	NP_051852		5' arm      3' arm
1152	+	596	87	22.5	-23.5			5' arm      3' arm
1186	-	4630	86	22.5	-24.1	NP_051716		5' arm      3' arm
1195	-	104559	89	22.5	-20.6			5' arm      3' arm
1177	+	157144	86	22.5	-24.1	NP_051716		5' arm      3' arm
1202	-	135416	90	22.5	-23.2			5' arm      3' arm
1212	-	161178	87	22.5	-23.5			5' arm      3' arm
1201	-	134716	90	22.5	-27.09	NP_051852		5' arm      3' arm
1210	-	158287	90	22.5	-28.2	NP_051715		5' arm      3' arm
1158	+	10495	87	23	-28.1	NP_051870		5' arm      3' arm
1206	-	151279	87	23	-28.1	NP_051870		5' arm      3' arm
1169	+	139762	89	23	-21.5	NP_051858		5' arm      3' arm
1171	+	150201	90	24	-24.79	NP_051869		5' arm      3' arm
1191	-	10829	85	24	-21	NP_051870		5' arm      3' arm
1192	-	11573	90	24	-24.79	NP_051869		5' arm      3' arm
1167	+	136265	89	24	-27.6	NP_051854		5' arm      3' arm
1172	+	150945	85	24	-21	NP_051870		5' arm      3' arm
1164	+	82031	89	24.5	-19.71	NP_051797		5' arm      3' arm
1203	-	145501	90	25	-20.8	NP_051863		3' arm
1182	-	2255	90	25.5	-23.8	NP_051879		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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