miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31031	+	47570	89	21.5	-32.8	YP_164466		5' arm      3' arm
31032	+	48424	89	22.5	-24.3	YP_164467		5' arm      3' arm
31033	+	51484	90	21.5	-26.2	YP_164469		5' arm      3' arm
31034	+	52045	90	20.5	-24	YP_164470		5' arm      3' arm
31035	+	52164	89	20.5	-20.2	YP_164470		5' arm      3' arm
31036	+	52468	90	22.5	-20.8	YP_164470		5' arm      3' arm
31037	+	53038	90	24	-23.3	YP_164470		5' arm      3' arm
31038	+	53647	86	22.5	-22.1	YP_164470		5' arm      3' arm
31039	+	54098	85	22	-21.1	YP_164470		5' arm      3' arm
31040	+	54738	90	20	-23.8	YP_164471		5' arm      3' arm
31041	+	54954	88	22	-22.7	YP_164471		5' arm      3' arm
31042	+	55390	90	19.5	-23.2	YP_164471		5' arm      3' arm
31043	+	56235	86	22	-26.6	YP_164471		5' arm      3' arm
31044	+	58487	88	19.5	-22.3	YP_164472		5' arm      3' arm
31045	+	58625	90	21	-25.2	YP_164472		5' arm      3' arm
31046	+	59096	90	21	-23.8	YP_164472		5' arm      3' arm
31047	+	59224	90	25	-27.7	YP_164472		5' arm      3' arm
31048	+	59404	89	23	-30.8	YP_164472		5' arm      3' arm
31049	+	60416	88	20	-20.1	YP_164472		5' arm      3' arm
31050	+	60620	89	20.5	-24.6	YP_164472		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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