miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
22414	+	19769	90	26	-29.5	NP_878224		5' arm      3' arm
22415	+	19964	90	19	-20	NP_878224		5' arm      3' arm
22416	+	23769	88	27.5	-29.1	NP_878229		5' arm      3' arm
22417	+	26061	88	19.5	-19.44	NP_878236		5' arm      3' arm
22418	+	26321	88	20.5	-20.9	NP_878237		5' arm      3' arm
22419	+	26860	90	21.5	-24.7	NP_878237		5' arm      3' arm
22420	+	27816	89	20.5	-29	NP_878237		5' arm      3' arm
22421	+	29169	90	21	-23.3			5' arm      3' arm
22422	-	1567	86	19	-23.4			5' arm      3' arm
22423	-	2022	87	20	-24.91	NP_878200		5' arm      3' arm
22424	-	2424	87	19	-21.9	NP_878200		5' arm      3' arm
22425	-	2556	89	19	-23.7	NP_878200		5' arm      3' arm
22426	-	3581	89	20.5	-20.2	NP_878201		5' arm      3' arm
22427	-	3966	89	22	-21.8	NP_878201		5' arm      3' arm
22428	-	5296	90	19	-25.31	NP_878203		5' arm      3' arm
22429	-	5645	88	22.5	-23.9	NP_878203		5' arm      3' arm
22430	-	5895	87	20	-22.6	NP_878203		5' arm      3' arm
22431	-	5989	90	19.5	-27.2			5' arm      3' arm
22432	-	8351	88	19	-26.3	NP_878209		5' arm      3' arm
22433	-	9098	89	23.5	-22.8	NP_878212		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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