miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21373	+	1675	89	20.5	-26.42			5' arm      3' arm
21478	+	84169	90	19	-25.8			5' arm      3' arm
21482	+	86018	89	27	-23.1			5' arm      3' arm
21483	+	86236	89	21.5	-21.1			5' arm      3' arm
21479	+	84348	80	20.5	-29.9			5' arm      3' arm
21391	+	24217	90	19.5	-21.8			5' arm      3' arm
21407	+	40955	89	20	-20.8			5' arm      3' arm
21444	+	61748	89	26	-23.6			5' arm      3' arm
21408	+	41064	88	19.5	-20.7			5' arm      3' arm
21501	+	94054	87	21	-19.9			5' arm      3' arm
21420	+	51842	90	21.5	-21.32			5' arm      3' arm
21518	+	108063	89	21	-23.5			5' arm      3' arm
21376	+	7393	88	24	-27.3			5' arm      3' arm
21374	+	6854	89	22	-21			5' arm      3' arm
21375	+	6958	89	21	-33.8			5' arm      3' arm
21377	+	8467	89	20	-24.4			5' arm      3' arm
21512	+	105583	89	22.5	-29.6			5' arm      3' arm
21511	+	104519	86	20.5	-23.3			5' arm      3' arm
21513	+	105775	89	21	-20.9			5' arm      3' arm
21457	+	69804	89	20	-27.1			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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