miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21664	-	85704	89	24.5	-20.2	NP_851898		5' arm      3' arm
21701	-	114677	89	24.5	-20.9	NP_851916		5' arm      3' arm
21551	+	147327	89	24.5	-31.3	NP_851930		5' arm      3' arm
21666	-	86433	89	24	-21.7			5' arm      3' arm
21710	-	131832	86	24	-29.1			5' arm      3' arm
21627	-	52949	90	24	-21.4	NP_851887		5' arm      3' arm
21477	+	83977	90	24	-23.4	NP_851897		5' arm      3' arm
21555	+	150592	86	24	-29.1			5' arm      3' arm
21376	+	7393	88	24	-27.3			5' arm      3' arm
21523	+	111681	90	24	-20.3	NP_851914		5' arm      3' arm
21705	-	118465	88	24	-27.3			5' arm      3' arm
21697	-	112315	85	24	-24.8			5' arm      3' arm
21553	+	148476	89	24	-26.1	NP_851932		5' arm      3' arm
21656	-	80254	90	24	-23.1	NP_851896		5' arm      3' arm
21719	-	137768	89	24	-23.7	NP_851922		5' arm      3' arm
21657	-	80880	89	24	-21.7	NP_851897		5' arm      3' arm
21472	+	81801	88	23.5	-24.3	NP_851897		5' arm      3' arm
21399	+	32941	90	23.5	-23.9	NP_851876		5' arm      3' arm
21504	+	97984	87	23.5	-29.7	NP_851906		5' arm      3' arm
21491	+	90853	87	23.5	-23.7	NP_851901		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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