miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
21393	+	25055	88	21.5	-31.2	NP_851871		5' arm      3' arm
21623	-	50305	88	19.5	-31.2	NP_851885		5' arm      3' arm
21660	-	82644	90	20.5	-31.2	NP_851897		5' arm      3' arm
21432	+	56099	90	19.5	-31.1	NP_851888		5' arm      3' arm
21556	+	155625	86	25	-31.1			5' arm      3' arm
21709	-	126799	86	25	-31.1			5' arm      3' arm
21688	-	103493	90	20.5	-30.8	NP_851908		5' arm      3' arm
21383	+	19508	88	21	-30.6	NP_851867		5' arm      3' arm
21544	+	137894	89	19.5	-30.4	NP_851922		5' arm      3' arm
21543	+	137680	89	21.5	-30.4	NP_851922		5' arm      3' arm
21405	+	39245	88	21.5	-30.4	NP_851878		5' arm      3' arm
21451	+	65104	87	20.5	-30.4	NP_851890		5' arm      3' arm
21683	-	93635	78	19.5	-30.32	NP_851902		5' arm      3' arm
21532	+	117340	89	20.5	-30.3			5' arm      3' arm
21560	-	8518	89	20.5	-30.3			5' arm      3' arm
21475	+	83150	85	21	-30	NP_851897		5' arm      3' arm
21479	+	84348	80	20.5	-29.9			5' arm      3' arm
21732	-	149571	89	22.5	-29.9			5' arm      3' arm
21639	-	61836	89	22.5	-29.9			5' arm      3' arm
21536	+	132853	89	22.5	-29.9			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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