miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
2790	-	98696	89	19	-23.8	YP_053098		5' arm      3' arm
2789	-	93722	89	20	-20	YP_053096		5' arm      3' arm
2788	-	91801	89	21.5	-22.2	YP_053046		5' arm      3' arm
2787	-	89904	90	19.5	-19.8	YP_053094		5' arm      3' arm
2786	-	88937	89	22.5	-27.8	YP_053090		5' arm      3' arm
2785	-	88439	90	21.5	-20.9	YP_053090		5' arm      3' arm
2784	-	87620	87	20	-21.6	YP_053092		5' arm      3' arm
2783	-	87391	90	19.5	-21.4	YP_053092		5' arm      3' arm
2782	-	85104	89	21	-20.4	YP_053091		5' arm      3' arm
2781	-	81651	88	23	-24.1	YP_053088		5' arm      3' arm
2780	-	79885	85	20	-22.5	YP_053088		5' arm      3' arm
2779	-	75494	89	19.5	-19.7	YP_053086		5' arm      3' arm
2778	-	74438	88	26	-31			5' arm      3' arm
2777	-	71559	88	19	-22	YP_053085		5' arm      3' arm
2776	-	68394	90	19.5	-21.6	YP_053082		5' arm      3' arm
2775	-	64695	90	24	-21.8	YP_053079		5' arm      3' arm
2774	-	63390	87	20.5	-23.1	YP_053078		5' arm      3' arm
2773	-	61623	89	20	-21	YP_053078		5' arm      3' arm
2772	-	61133	89	22	-25.2	YP_053077		5' arm      3' arm
2771	-	60553	90	19	-22.2	YP_053077		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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