miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
2786	-	88937	89	22.5	-27.8	YP_053090		5' arm      3' arm
2745	-	23960	87	22	-27.7	YP_053062		5' arm      3' arm
2652	+	50212	90	20	-27.7	YP_053073		5' arm      3' arm
2704	+	117899	89	22.5	-27.5	YP_053108		5' arm      3' arm
2742	-	17808	87	22	-27.3	YP_053058		5' arm      3' arm
2687	+	97466	90	22	-27.1	YP_053098		5' arm      3' arm
2756	-	38582	89	19	-27.1	YP_053069		5' arm      3' arm
2814	-	136364	90	19	-27.1	YP_053119		5' arm      3' arm
2659	+	60698	89	22	-27.1	YP_053077		5' arm      3' arm
2646	+	37380	85	19	-27	YP_053069		5' arm      3' arm
2721	+	142093	89	22.5	-26.4			5' arm      3' arm
2651	+	49535	77	19.5	-26.4	YP_053073		5' arm      3' arm
2720	+	141351	90	22.5	-26.4	YP_053109		5' arm      3' arm
2806	-	121067	89	22.5	-26.4			5' arm      3' arm
2807	-	121809	90	22.5	-26.4	YP_053109		5' arm      3' arm
2818	-	139470	89	22.5	-26.3			5' arm      3' arm
2710	+	123690	89	22.5	-26.3			5' arm      3' arm
2713	+	131221	87	20.5	-26.1	YP_053115		5' arm      3' arm
2636	+	12090	88	20.5	-26	YP_053055		5' arm      3' arm
2623	+	657	89	19	-25.9			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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