miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
2661	+	61414	89	20	-22.1	YP_053077		5' arm      3' arm
2662	+	62397	89	21	-25.4	YP_053078		5' arm      3' arm
2663	+	65186	90	23.5	-31.5	YP_053080		5' arm      3' arm
2664	+	65277	89	21	-20.6	YP_053081		5' arm      3' arm
2665	+	65630	90	19	-29.3	YP_053081		5' arm      3' arm
2666	+	65730	89	24.5	-28	YP_053081		5' arm      3' arm
2667	+	66558	90	21	-23.3	YP_053080		5' arm      3' arm
2668	+	72871	89	20	-21.77	YP_053085		5' arm      3' arm
2669	+	74353	89	22.5	-31.2			5' arm      3' arm
2670	+	75072	89	19	-20.5	YP_053086		5' arm      3' arm
2671	+	76038	89	20	-20	YP_053086		5' arm      3' arm
2672	+	76292	89	20.5	-20.4			5' arm      3' arm
2673	+	79725	86	19.5	-25.4	YP_053088		5' arm      3' arm
2674	+	80928	90	21	-19.7	YP_053088		5' arm      3' arm
2675	+	82800	90	22	-20.4	YP_053089		5' arm      3' arm
2676	+	82900	89	21	-20.8	YP_053089		5' arm      3' arm
2677	+	84044	88	20.5	-21	YP_053090		5' arm      3' arm
2678	+	84682	87	19.5	-20.9	YP_053091		5' arm      3' arm
2679	+	86480	90	20	-20.7	YP_053091		5' arm      3' arm
2680	+	86945	80	19.5	-22.5	YP_053092		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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