miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
2726	+	145173	89	27.5	-30.6	YP_053108		5' arm      3' arm
2802	-	118988	87	20.5	-29.8			5' arm      3' arm
2725	+	144172	87	20.5	-29.8			5' arm      3' arm
2749	-	30749	88	24.5	-29.69	YP_053066		5' arm      3' arm
2683	+	90190	88	22	-29.3	YP_053094		5' arm      3' arm
2665	+	65630	90	19	-29.3	YP_053081		5' arm      3' arm
2748	-	30514	89	21	-29.11	YP_053066		5' arm      3' arm
2817	-	138506	83	20.5	-28.7	YP_053121		5' arm      3' arm
2711	+	124654	83	20.5	-28.7	YP_053121		5' arm      3' arm
2762	-	45285	90	22	-28.6	YP_053069		5' arm      3' arm
2810	-	124934	90	20	-28.3	YP_053111		5' arm      3' arm
2717	+	138226	90	20	-28.3	YP_053111		5' arm      3' arm
2654	+	53450	90	23	-28.3	YP_053075		5' arm      3' arm
2805	-	120712	90	20.5	-28.2			5' arm      3' arm
2752	-	34411	90	21.5	-28.2	YP_053068		5' arm      3' arm
2722	+	142448	90	20.5	-28.2			5' arm      3' arm
2746	-	27412	89	21.5	-28.1	YP_053064		5' arm      3' arm
2666	+	65730	89	24.5	-28	YP_053081		5' arm      3' arm
2733	-	7408	89	22	-28	YP_053052		5' arm      3' arm
2739	-	15391	90	22	-27.8	YP_053058		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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