miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
6278	-	78895	77	20	-24.7	NP_045260		5' arm      3' arm
6277	-	70389	81	19	-19.5	NP_045256		5' arm      3' arm
6276	-	67868	89	22.5	-24.9	NP_045254		5' arm      3' arm
6275	-	65875	87	19	-23.6	NP_045252		5' arm      3' arm
6274	-	56521	89	20.5	-20.5	NP_045248		5' arm      3' arm
6273	-	45171	90	21.5	-19.9	NP_045241		5' arm      3' arm
6272	-	44195	86	19	-26.6	NP_045241		5' arm      3' arm
6271	-	39901	88	20	-23.1	NP_045241		5' arm      3' arm
6270	-	38142	90	22	-24	NP_045241		5' arm      3' arm
6269	-	30208	88	23	-23.6	NP_045238		5' arm      3' arm
6268	-	29086	79	22.5	-20.4	NP_045238		5' arm      3' arm
6267	-	26305	80	19	-25.1	NP_045236		5' arm      3' arm
6266	-	26217	87	21	-23.3	NP_045236		5' arm      3' arm
6265	-	23877	88	23	-23.3			5' arm      3' arm
6264	-	20369	87	21	-25.8	NP_045232		5' arm      3' arm
6263	-	19765	90	27	-21.1	NP_045231		5' arm      3' arm
6262	-	14461	89	21.5	-23.8	NP_045229
6261	-	13558	86	22	-21.3	NP_045229		5' arm      3' arm
6260	-	12966	81	23.5	-22.3	NP_045228		5' arm      3' arm
6259	-	12594	83	21	-21.6	NP_045228		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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