miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
6270	-	38142	90	22	-24	NP_045241		5' arm      3' arm
6205	+	41732	85	21	-21.74	NP_045241		5' arm      3' arm
6206	+	42630	90	20	-26.5	NP_045241		5' arm      3' arm
6203	+	38435	89	21	-20.3	NP_045241		5' arm      3' arm
6272	-	44195	86	19	-26.6	NP_045241		5' arm      3' arm
6273	-	45171	90	21.5	-19.9	NP_045241		5' arm      3' arm
6207	+	50843	89	19.5	-22.5	NP_045246		5' arm      3' arm
6274	-	56521	89	20.5	-20.5	NP_045248		5' arm      3' arm
6208	+	58618	89	21.5	-21.3	NP_045248		5' arm      3' arm
6275	-	65875	87	19	-23.6	NP_045252		5' arm      3' arm
6209	+	66616	88	19	-20.5	NP_045252		5' arm      3' arm
6276	-	67868	89	22.5	-24.9	NP_045254		5' arm      3' arm
6210	+	67037	86	20.5	-20.1	NP_045254		5' arm      3' arm
6211	+	68273	89	19.5	-25.3	NP_045254		5' arm      3' arm
6212	+	68817	89	21.5	-25.8	NP_045255		5' arm      3' arm
6213	+	70256	87	19	-31.5	NP_045256		5' arm      3' arm
6277	-	70389	81	19	-19.5	NP_045256		5' arm      3' arm
6214	+	72483	90	19.5	-27.3	NP_045257		5' arm      3' arm
6218	+	77999	89	24.5	-23	NP_045260		5' arm      3' arm
6221	+	79361	89	21.5	-20.2	NP_045260		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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