miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29510	+	125657	90	19.5	-22.2			5' arm      3' arm
29496	+	108293	89	19	-24			5' arm      3' arm
29519	+	142549	90	22	-28.1			5' arm      3' arm
29515	+	136127	86	19	-31			5' arm      3' arm
29647	-	134122	86	20	-26.4			5' arm      3' arm
29640	-	125327	90	21	-23.5			5' arm      3' arm
29366	+	2268	84	19.5	-24			5' arm      3' arm
29644	-	129944	86	19.5	-19.9			5' arm      3' arm
29522	-	325	89	19.5	-21.2			5' arm      3' arm
29643	-	129666	88	21.5	-19.9			5' arm      3' arm
29520	+	143352	87	19	-36.6			5' arm      3' arm
29648	-	135504	83	21	-21.4			5' arm      3' arm
29499	+	114259	89	23	-27.3			5' arm      3' arm
29511	+	128795	90	22.5	-23.13			5' arm      3' arm
29513	+	133527	90	19.5	-20			5' arm      3' arm
29512	+	132245	89	21.5	-20			5' arm      3' arm
29514	+	134102	90	22.5	-19.7			5' arm      3' arm
29645	-	130225	88	22.5	-21.4			5' arm      3' arm
29649	-	136309	89	19	-24			5' arm      3' arm
29646	-	130343	89	23	-27.3			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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