miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29639	-	121810	86	21	-26.8	YP_068387		5' arm      3' arm
29423	+	44419	88	22	-26.8	YP_068340		5' arm      3' arm
29552	-	45445	86	22	-26.6	YP_068341		5' arm      3' arm
29545	-	30018	88	19.5	-26.6	YP_068335		5' arm      3' arm
29593	-	77251	90	21	-26.41	YP_068361		5' arm      3' arm
29498	+	110480	86	20	-26.4			5' arm      3' arm
29369	+	3577	89	22.5	-26.4	YP_068320		5' arm      3' arm
29647	-	134122	86	20	-26.4			5' arm      3' arm
29632	-	119132	90	20.5	-26.4	YP_068385		5' arm      3' arm
29404	+	27346	89	22	-26.4	YP_068333		5' arm      3' arm
29442	+	63365	87	23	-26.4			5' arm      3' arm
29599	-	82456	87	25	-26.4	YP_068366		5' arm      3' arm
29566	-	52901	90	19	-26.4	YP_068346		5' arm      3' arm
29565	-	51677	89	21	-26.3	YP_068345		5' arm      3' arm
29641	-	126148	86	22.5	-26.24	YP_068391		5' arm      3' arm
29573	-	63133	85	19	-26.2			5' arm      3' arm
29591	-	71887	87	22	-26.2			5' arm      3' arm
29554	-	47114	88	22.5	-26.2	YP_068342		5' arm      3' arm
29434	+	52234	89	20	-26.1	YP_068345		5' arm      3' arm
29375	+	6531	84	21	-26.1	YP_068322		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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