miRNA display CGI


Results 61 - 80 of 285 are showing below:
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GenBank Identifier RefSeq Acc. Name
51557483 NC_006151.1 Suid herpesvirus 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
29489 + 98745 90 27 -27.8 5' arm      3' arm
29468 + 84393 84 23.5 -27.8 YP_068367 5' arm      3' arm
29449 + 70910 89 25 -27.8 YP_068357 5' arm      3' arm
29586 - 68466 87 19 -27.8 YP_068356 5' arm      3' arm
29417 + 36346 89 19.5 -27.61 YP_068339 5' arm      3' arm
29584 - 67901 90 20 -27.5 YP_068356 5' arm      3' arm
29601 - 84853 90 20 -27.4 YP_068368 5' arm      3' arm
29541 - 27416 88 19.5 -27.4 YP_068333 5' arm      3' arm
29624 - 105766 88 20 -27.3 YP_068381 5' arm      3' arm
29646 - 130343 89 23 -27.3 5' arm      3' arm
29549 - 41177 84 20 -27.3 YP_068339 5' arm      3' arm
29517 + 138836 88 20 -27.3 YP_068393 5' arm      3' arm
29499 + 114259 89 23 -27.3 5' arm      3' arm
29614 - 95843 88 23 -27.1 5' arm      3' arm
29478 + 94997 89 20 -27 YP_068376 5' arm      3' arm
29527 - 9082 90 23 -27 YP_068324 5' arm      3' arm
29427 + 45516 90 19 -26.9 YP_068341 5' arm      3' arm
29403 + 27138 90 19.5 -26.9 YP_068333 5' arm      3' arm
29639 - 121810 86 21 -26.8 YP_068387 5' arm      3' arm
29638 - 120743 89 22.5 -26.8 YP_068386 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.