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| GenBank Identifier | RefSeq Acc. | Name |
| 21716071 | NC_004065.1 | Murid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 15700 | + | 42101 | 90 | 20 | -23.6 | 5' arm 3' arm | |||
| 15720 | + | 57386 | 90 | 25 | -29.7 | 5' arm 3' arm | |||
| 15721 | + | 57487 | 88 | 19 | -23.6 | 5' arm 3' arm | |||
| 15738 | + | 67724 | 89 | 24.5 | -35.36 | 5' arm 3' arm | |||
| 15708 | + | 48508 | 88 | 21.5 | -24.6 | 5' arm 3' arm | |||
| 15707 | + | 48200 | 90 | 24 | -20.9 | 5' arm 3' arm | |||
| 15703 | + | 45641 | 89 | 20 | -24.3 | 5' arm 3' arm | |||
| 15698 | + | 41658 | 90 | 19.5 | -23.7 | 5' arm 3' arm | |||
| 15699 | + | 41873 | 90 | 19.5 | -24.6 | 5' arm 3' arm | |||
| 15706 | + | 48109 | 89 | 20 | -19.81 | 5' arm 3' arm | |||
| 15705 | + | 47670 | 90 | 23.5 | -24.2 | 5' arm 3' arm | |||
| 15735 | + | 64331 | 88 | 21 | -30.1 | 5' arm 3' arm | |||
| 15659 | + | 278 | 90 | 26 | -25.7 | 5' arm 3' arm | |||
| 15745 | + | 72027 | 90 | 22.5 | -22.2 | 5' arm 3' arm | |||
| 15658 | + | 51 | 86 | 21.5 | -23.1 | 5' arm 3' arm | |||
| 15660 | + | 384 | 88 | 21.5 | -27.8 | 5' arm 3' arm | |||
| 15663 | + | 2049 | 88 | 21.5 | -20.8 | 5' arm 3' arm | |||
| 15739 | + | 68185 | 90 | 22.5 | -34.5 | 5' arm 3' arm | |||
| 15737 | + | 66876 | 87 | 20.5 | -23.2 | 5' arm 3' arm | |||
| 15736 | + | 66037 | 90 | 19.5 | -22.8 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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