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| GenBank Identifier | RefSeq Acc. | Name |
| 21716071 | NC_004065.1 | Murid herpesvirus 1 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 15743 | + | 69465 | 86 | 20 | -24 | 5' arm 3' arm | |||
| 15744 | + | 71190 | 87 | 20 | -26.1 | 5' arm 3' arm | |||
| 15768 | + | 88977 | 89 | 19 | -22.8 | 5' arm 3' arm | |||
| 15770 | + | 89462 | 85 | 20.5 | -20.2 | 5' arm 3' arm | |||
| 15778 | + | 94477 | 86 | 23.5 | -32.1 | 5' arm 3' arm | |||
| 15663 | + | 2049 | 88 | 21.5 | -20.8 | 5' arm 3' arm | |||
| 15660 | + | 384 | 88 | 21.5 | -27.8 | 5' arm 3' arm | |||
| 15658 | + | 51 | 86 | 21.5 | -23.1 | 5' arm 3' arm | |||
| 15774 | + | 90989 | 89 | 22 | -22.6 | 5' arm 3' arm | |||
| 15659 | + | 278 | 90 | 26 | -25.7 | 5' arm 3' arm | |||
| 15769 | + | 89325 | 89 | 20.5 | -20.4 | 5' arm 3' arm | |||
| 15761 | + | 82346 | 85 | 23 | -20.7 | 5' arm 3' arm | |||
| 15741 | + | 68800 | 89 | 19 | -25.3 | 5' arm 3' arm | |||
| 15762 | + | 82462 | 88 | 20.5 | -27.1 | 5' arm 3' arm | |||
| 15759 | + | 80345 | 88 | 19.5 | -20.6 | 5' arm 3' arm | |||
| 15760 | + | 82098 | 88 | 21 | -26.5 | 5' arm 3' arm | |||
| 15767 | + | 88783 | 89 | 21.5 | -29.8 | 5' arm 3' arm | |||
| 15766 | + | 88355 | 89 | 21.5 | -27.1 | 5' arm 3' arm | |||
| 15771 | + | 89803 | 87 | 22 | -25.2 | 5' arm 3' arm | |||
| 15763 | + | 82600 | 88 | 19 | -30.7 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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