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| GenBank Identifier | RefSeq Acc. | Name |
| 82503188 | NC_007605.1 | Human herpesvirus 4 |
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| ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF |
Known viral miRNA
|
Match to own genomic region# | Target prediction with RNAhybrid |
| 33273 | + | 9009 | 86 | 28 | -35 | 5' arm 3' arm | |||
| 33268 | + | 4647 | 85 | 19 | -22.3 | YP_401633 | 5' arm 3' arm | ||
| 33265 | + | 3666 | 89 | 19.5 | -22.7 | YP_401633 | 5' arm 3' arm | ||
| 33266 | + | 3879 | 90 | 20 | -20 | YP_401633 | 5' arm 3' arm | ||
| 33264 | + | 2377 | 88 | 20 | -20.7 | YP_401633 | 5' arm 3' arm | ||
| 33326 | + | 70901 | 89 | 19.5 | -27.9 | YP_401659 | 5' arm 3' arm | ||
| 33424 | - | 1980 | 89 | 21 | -23.8 | YP_401633 | 5' arm 3' arm | ||
| 33297 | + | 52331 | 88 | 23 | -28.7 | YP_401652 | 5' arm 3' arm | ||
| 33289 | + | 48187 | 88 | 19 | -21.1 | YP_401650 | 5' arm 3' arm | ||
| 33287 | + | 45981 | 88 | 20 | -22.1 | YP_401648 | 5' arm 3' arm | ||
| 33291 | + | 49409 | 89 | 20.5 | -28.8 | YP_401651 | 5' arm 3' arm | ||
| 33290 | + | 48433 | 85 | 21 | -21.3 | YP_401650 | 5' arm 3' arm | ||
| 33288 | + | 47652 | 88 | 23 | -22.3 | YP_401650 | 5' arm 3' arm | ||
| 33286 | + | 45160 | 90 | 19.5 | -21.2 | YP_401648 | 5' arm 3' arm | ||
| 33283 | + | 44019 | 79 | 20.5 | -26.1 | YP_401647 | 5' arm 3' arm | ||
| 33328 | + | 72319 | 83 | 21.5 | -27.8 | YP_401662 | 5' arm 3' arm | ||
| 33280 | + | 41814 | 87 | 21 | -20.7 | 5' arm 3' arm | |||
| 33285 | + | 44955 | 89 | 21.5 | -27.7 | YP_401648 | 5' arm 3' arm | ||
| 33284 | + | 44529 | 90 | 21.5 | -29.6 | YP_401647 | 5' arm 3' arm | ||
| 33279 | + | 41673 | 88 | 21.5 | -22.5 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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