miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12717	+	9475	89	25.5	-21	NP_543068		5' arm      3' arm
12718	+	11118	83	19	-20.4	NP_543069		5' arm      3' arm
12719	+	12352	90	22.5	-27.2	NP_543071		5' arm      3' arm
12720	+	19156	89	20	-24.6	NP_543080		5' arm      3' arm
12721	+	19252	90	21	-22.2	NP_543080		5' arm      3' arm
12722	+	20699	85	20.5	-25	NP_543084		5' arm      3' arm
12723	+	20796	82	21.5	-22.9			5' arm      3' arm
12724	+	24159	90	25	-20	NP_543089		5' arm      3' arm
12725	+	24394	89	23	-24.9	NP_543090		5' arm      3' arm
12726	+	25541	89	20.5	-21.9	NP_543091		5' arm      3' arm
12727	+	27130	89	19.5	-20.9	NP_543092		5' arm      3' arm
12728	+	28157	87	25	-24.2	NP_543094		5' arm      3' arm
12729	+	28529	86	23.5	-28.2	NP_543094		5' arm      3' arm
12730	+	28634	90	21	-23.8	NP_543095		5' arm      3' arm
12731	+	28921	90	19.5	-26.5	NP_543095		5' arm      3' arm
12732	+	29915	86	19.5	-26.6	NP_543096		5' arm      3' arm
12733	+	30891	88	21.5	-20.5	NP_543097		5' arm      3' arm
12734	+	31083	90	20	-22.2	NP_543097		5' arm      3' arm
12735	+	31629	89	19.5	-19.8	NP_543099		5' arm      3' arm
12736	+	31769	90	22	-23.84	NP_543099		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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