miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
10232	-	97632	85	24.5	-36.94			5' arm      3' arm
10202	+	21241	89	24	-31.6			5' arm      3' arm
10231	-	87993	87	19.5	-29.2	NP_076556		5' arm      3' arm
10230	-	86295	90	23	-28.8	NP_076556		5' arm      3' arm
10222	-	17827	90	22.5	-28.3	NP_076502		5' arm      3' arm
10210	+	97068	83	22.5	-28.3	NP_076563		5' arm      3' arm
10228	-	80555	90	21	-28	NP_076555		5' arm      3' arm
10214	+	102334	86	20	-26.71	NP_076568		5' arm      3' arm
10212	+	98014	89	22	-26.22			5' arm      3' arm
10218	-	216	85	19.5	-26.1			5' arm      3' arm
10203	+	23760	89	21.5	-25.6	NP_076509		5' arm      3' arm
10223	-	21329	89	22.5	-25.53			5' arm      3' arm
10225	-	24880	89	20	-25.2	NP_076509		5' arm      3' arm
10201	+	15613	89	21	-24.3	NP_076501		5' arm      3' arm
10224	-	21949	90	24.5	-24			5' arm      3' arm
10216	+	105156	89	25.5	-23.6	NP_076569		5' arm      3' arm
10207	+	68407	90	24	-23.3	NP_076547		5' arm      3' arm
10211	+	97173	89	24	-23.2	NP_076563		5' arm      3' arm
10209	+	86206	90	20	-23	NP_076556		5' arm      3' arm
10219	-	2745	89	19.5	-22.71	NP_076495		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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