miRNA display CGI


Results 1 - 20 of 34 are showing below:
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GenBank Identifier RefSeq Acc. Name
13095578 NC_002665.1 Bovine herpesvirus 4

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
10218 - 216 85 19.5 -26.1 5' arm      3' arm
10212 + 98014 89 22 -26.22 5' arm      3' arm
10214 + 102334 86 20 -26.71 NP_076568 5' arm      3' arm
10213 + 100059 90 19.5 -21.5 NP_076567 5' arm      3' arm
10216 + 105156 89 25.5 -23.6 NP_076569 5' arm      3' arm
10217 + 108361 90 20.5 -21.9 NP_076572 5' arm      3' arm
10215 + 104922 89 20 -20.6 NP_076569 5' arm      3' arm
10233 - 107344 88 19 -21.9 5' arm      3' arm
10232 - 97632 85 24.5 -36.94 5' arm      3' arm
10210 + 97068 83 22.5 -28.3 NP_076563 5' arm      3' arm
10211 + 97173 89 24 -23.2 NP_076563 5' arm      3' arm
10209 + 86206 90 20 -23 NP_076556 5' arm      3' arm
10201 + 15613 89 21 -24.3 NP_076501 5' arm      3' arm
10202 + 21241 89 24 -31.6 5' arm      3' arm
10204 + 26127 83 24.5 -21.6 NP_076511 5' arm      3' arm
10203 + 23760 89 21.5 -25.6 NP_076509 5' arm      3' arm
10205 + 26472 90 21 -21 NP_076511 5' arm      3' arm
10206 + 59341 90 21 -21.7 NP_076537 5' arm      3' arm
10207 + 68407 90 24 -23.3 NP_076547 5' arm      3' arm
10208 + 72312 88 19.5 -21.9 NP_076549 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.