miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31318	+	28528	86	20.5	-30.4			5' arm      3' arm
31319	+	55975	90	20	-19.8	YP_182365		5' arm      3' arm
31320	+	65806	90	21	-23.39	YP_182366		5' arm      3' arm
31321	+	66196	82	19.5	-20.7	YP_182367		5' arm      3' arm
31322	+	68204	85	20.5	-28.4	YP_182368		5' arm      3' arm
31323	+	110266	89	20.5	-22.86	YP_182396		5' arm      3' arm
31324	+	111359	88	20.5	-26.5	YP_182396		5' arm      3' arm
31325	+	112774	90	20.5	-27.1			5' arm      3' arm
31326	+	112975	84	21	-22.6			5' arm      3' arm
31327	+	114421	86	22	-24.8			5' arm      3' arm
31328	+	115032	86	25.5	-28.5			5' arm      3' arm
31329	+	115332	87	22	-28.6	YP_182411		5' arm      3' arm
31330	+	115698	90	20	-20.4	YP_182411		5' arm      3' arm
31331	+	116461	90	25.5	-23.3	YP_182397		5' arm      3' arm
31332	+	120939	86	20.5	-21.3			5' arm      3' arm
31333	+	121511	87	19	-21.64			5' arm      3' arm
31334	+	121624	87	20	-27.3			5' arm      3' arm
31335	+	122131	89	19	-21.4	YP_182410		5' arm      3' arm
31336	+	122347	89	21.5	-22.1	YP_182410		5' arm      3' arm
31337	+	126887	90	19	-28.9	YP_182402		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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