miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31379	-	126361	88	19	-29.5	YP_182401		5' arm      3' arm
31378	-	123887	85	19	-26.3	YP_182399		5' arm      3' arm
31377	-	122140	90	23	-21.6			5' arm      3' arm
31376	-	121874	89	20	-23.6			5' arm      3' arm
31375	-	116964	80	22	-20.4	YP_182397		5' arm      3' arm
31374	-	116077	89	20	-29	YP_182397		5' arm      3' arm
31373	-	115625	89	19.5	-30.4	YP_182397		5' arm      3' arm
31372	-	115515	90	19.5	-28.6	YP_182397		5' arm      3' arm
31371	-	115418	87	23.5	-30.12	YP_182397		5' arm      3' arm
31370	-	115239	88	19.5	-20.3	YP_182397		5' arm      3' arm
31369	-	115120	89	22	-26.4			5' arm      3' arm
31368	-	112854	70	21	-28			5' arm      3' arm
31367	-	112602	88	28.5	-23.6			5' arm      3' arm
31366	-	112348	89	21.5	-22.8			5' arm      3' arm
31365	-	110055	88	20	-19.8			5' arm      3' arm
31364	-	101606	89	19.5	-19.5	YP_182389		5' arm      3' arm
31363	-	24110	80	20.5	-20.2	YP_182345		5' arm      3' arm
31362	-	20063	88	20.5	-24.7	YP_182342		5' arm      3' arm
31361	-	19848	90	23.5	-23.6	YP_182342		5' arm      3' arm
31360	-	17045	90	19	-21.7	YP_182338		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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