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| GenBank Identifier | RefSeq Acc. | Name |
| 57790931 | NC_006623.1 | Gallid herpesvirus 1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 31302 | + | 1581 | 90 | 23.5 | -26.8 | 5' arm 3' arm | |||
| 31361 | - | 19848 | 90 | 23.5 | -23.6 | YP_182342 | 5' arm 3' arm | ||
| 31308 | + | 2699 | 89 | 23.5 | -21.53 | 5' arm 3' arm | |||
| 31311 | + | 7945 | 88 | 23.5 | -32.8 | 5' arm 3' arm | |||
| 31342 | + | 139585 | 90 | 23 | -21.6 | 5' arm 3' arm | |||
| 31377 | - | 122140 | 90 | 23 | -21.6 | 5' arm 3' arm | |||
| 31338 | + | 128908 | 82 | 23 | -21.4 | YP_182403 | 5' arm 3' arm | ||
| 31383 | - | 131314 | 88 | 23 | -22.4 | YP_182404 | 5' arm 3' arm | ||
| 31388 | - | 137069 | 88 | 23 | -24 | YP_182408 | 5' arm 3' arm | ||
| 31384 | - | 131702 | 90 | 22.5 | -23.2 | YP_182404 | 5' arm 3' arm | ||
| 31385 | - | 133599 | 83 | 22.5 | -22.3 | YP_182405 | 5' arm 3' arm | ||
| 31357 | - | 2398 | 89 | 22.5 | -20.9 | 5' arm 3' arm | |||
| 31351 | - | 373 | 84 | 22.5 | -31.5 | 5' arm 3' arm | |||
| 31310 | + | 4314 | 90 | 22.5 | -23.5 | 5' arm 3' arm | |||
| 31314 | + | 24208 | 89 | 22.5 | -26.3 | YP_182345 | 5' arm 3' arm | ||
| 31399 | - | 147304 | 86 | 22 | -24.8 | 5' arm 3' arm | |||
| 31317 | + | 26890 | 90 | 22 | -22.7 | YP_182347 | 5' arm 3' arm | ||
| 31327 | + | 114421 | 86 | 22 | -24.8 | 5' arm 3' arm | |||
| 31397 | - | 146393 | 87 | 22 | -28.6 | YP_182411 | 5' arm 3' arm | ||
| 31344 | + | 144761 | 80 | 22 | -20.4 | YP_182411 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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