miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
31376	-	121874	89	20	-23.6			5' arm      3' arm
31380	-	129160	89	19	-21	YP_182403		5' arm      3' arm
31389	-	137341	88	25.5	-24	YP_182408		5' arm      3' arm
31397	-	146393	87	22	-28.6	YP_182411		5' arm      3' arm
31365	-	110055	88	20	-19.8			5' arm      3' arm
31369	-	115120	89	22	-26.4			5' arm      3' arm
31386	-	134056	90	20	-23.8	YP_182406		5' arm      3' arm
31399	-	147304	86	22	-24.8			5' arm      3' arm
31371	-	115418	87	23.5	-30.12	YP_182397		5' arm      3' arm
31395	-	145264	90	25.5	-23.3	YP_182397		5' arm      3' arm
31381	-	130081	90	19.5	-29.6	YP_182404		5' arm      3' arm
31378	-	123887	85	19	-26.3	YP_182399		5' arm      3' arm
31383	-	131314	88	23	-22.4	YP_182404		5' arm      3' arm
31388	-	137069	88	23	-24	YP_182408		5' arm      3' arm
31392	-	140101	87	20	-27.3			5' arm      3' arm
31396	-	146027	90	20	-20.4	YP_182411		5' arm      3' arm
31362	-	20063	88	20.5	-24.7	YP_182342		5' arm      3' arm
31364	-	101606	89	19.5	-19.5	YP_182389		5' arm      3' arm
31373	-	115625	89	19.5	-30.4	YP_182397		5' arm      3' arm
31366	-	112348	89	21.5	-22.8			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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