miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
3115	-	107225	87	20	-26.3	NP_041163		5' arm      3' arm
3118	-	111049	89	22.5	-22.9	NP_041165		5' arm      3' arm
3132	-	124722	86	20	-27.7	NP_041096		5' arm      3' arm
3134	-	128876	89	21.5	-26.2			5' arm      3' arm
3106	-	95833	90	20	-24.8	NP_041159		5' arm      3' arm
3110	-	100369	87	21	-27.5	NP_041162		5' arm      3' arm
3121	-	115696	89	20	-20.6			5' arm      3' arm
3135	-	130184	84	20	-23.1	NP_041101		5' arm      3' arm
3111	-	101930	90	21	-30	NP_041162		5' arm      3' arm
3136	-	130838	90	21	-24.3	NP_041102		5' arm      3' arm
3119	-	111998	89	19	-19.6	NP_041166		5' arm      3' arm
3113	-	103120	90	23.5	-20.3	NP_041162		5' arm      3' arm
3122	-	117571	86	20.5	-30.3	NP_041170		5' arm      3' arm
3131	-	124550	88	20	-19.6	NP_041096		5' arm      3' arm
3128	-	123617	90	22	-26.3			5' arm      3' arm
3133	-	126920	87	20	-20.5	NP_041176		5' arm      3' arm
3101	-	92953	90	20.5	-25.5	NP_041159		5' arm      3' arm
3102	-	93414	90	19	-27.2	NP_041159		5' arm      3' arm
3104	-	94161	84	21.5	-21.4	NP_041159		5' arm      3' arm
3108	-	98186	85	20.5	-24.8	NP_041161		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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