miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8498	+	39236	87	21	-20	NP_037798		5' arm      3' arm
8549	-	35850	90	20	-20	NP_037795		5' arm      3' arm
8516	+	107887	90	23	-20.1	NP_037871		5' arm      3' arm
8520	+	112157	81	21	-20.1	NP_037874		5' arm      3' arm
8571	-	113837	90	19.5	-20.2	NP_037875		5' arm      3' arm
8511	+	95381	89	23	-20.5	NP_037857		5' arm      3' arm
8509	+	93250	89	24	-20.7	NP_037853		5' arm      3' arm
8560	-	61078	89	19	-20.7	NP_037822		5' arm      3' arm
8500	+	42250	89	27	-20.7			5' arm      3' arm
8499	+	41540	90	20.5	-20.7	NP_037801		5' arm      3' arm
8483	+	6741	86	26	-20.8	NP_037765		5' arm      3' arm
8508	+	86830	90	21	-20.8	NP_037851		5' arm      3' arm
8510	+	95138	80	24	-21	NP_037857		5' arm      3' arm
8564	-	79970	90	22.5	-21	NP_037840		5' arm      3' arm
8553	-	42338	89	26	-21.01			5' arm      3' arm
8524	+	116076	90	20.5	-21.2	NP_037878		5' arm      3' arm
8574	-	129013	86	19.5	-21.3			5' arm      3' arm
8502	+	46216	87	23	-21.4	NP_037806		5' arm      3' arm
8555	-	46303	87	20.5	-21.5	NP_037806		5' arm      3' arm
8529	-	507	89	23	-21.5	NP_037761		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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