miRNA display CGI


Results 1 - 20 of 96 are showing below:
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GenBank Identifier RefSeq Acc. Name
9634221 NC_002169.1 Spodoptera exigua nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8493 + 28046 90 19 -29.3 NP_037787 5' arm      3' arm
8560 - 61078 89 19 -20.7 NP_037822 5' arm      3' arm
8530 - 4321 89 19 -22.1 NP_037764 5' arm      3' arm
8565 - 84195 89 19 -23.6 NP_037847 5' arm      3' arm
8556 - 47078 89 19 -22.62 NP_037808 5' arm      3' arm
8576 - 134414 86 19 -21.8 NP_037899 5' arm      3' arm
8574 - 129013 86 19.5 -21.3 5' arm      3' arm
8571 - 113837 90 19.5 -20.2 NP_037875 5' arm      3' arm
8559 - 60751 90 19.5 -24.4 NP_037822 5' arm      3' arm
8541 - 15898 90 19.5 -24.2 NP_037771 5' arm      3' arm
8481 + 2772 90 19.5 -25.6 NP_037763 5' arm      3' arm
8549 - 35850 90 20 -20 NP_037795 5' arm      3' arm
8567 - 100700 89 20 -31.11 5' arm      3' arm
8518 + 109811 85 20 -26.7 NP_037872 5' arm      3' arm
8519 + 110313 85 20 -22.8 NP_037872 5' arm      3' arm
8554 - 46021 89 20 -26 NP_037806 5' arm      3' arm
8501 + 43951 89 20 -23.3 NP_037804 5' arm      3' arm
8504 + 48083 88 20.5 -28.2 NP_037810 5' arm      3' arm
8522 + 114485 90 20.5 -24.3 NP_037876 5' arm      3' arm
8555 - 46303 87 20.5 -21.5 NP_037806 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.