miRNA display CGI


Results 1 - 20 of 96 are showing below:
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GenBank Identifier RefSeq Acc. Name
9634221 NC_002169.1 Spodoptera exigua nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8561 - 71781 89 33 -34.4 5' arm      3' arm
8525 + 120144 89 33 -37 5' arm      3' arm
8570 - 105677 89 32.5 -30.9 5' arm      3' arm
8537 - 11120 88 32 -35 5' arm      3' arm
8535 - 10792 89 31.5 -35 5' arm      3' arm
8514 + 105294 89 31.5 -31.4 5' arm      3' arm
8487 + 11033 90 31 -31.8 5' arm      3' arm
8557 - 52788 87 29 -29.5 5' arm      3' arm
8513 + 105183 89 29 -27.7 5' arm      3' arm
8505 + 52703 87 29 -25.9 5' arm      3' arm
8540 - 11654 89 28.5 -30.1 5' arm      3' arm
8536 - 10901 89 28.5 -29.8 5' arm      3' arm
8551 - 41982 83 28.5 -29.3 5' arm      3' arm
8539 - 11367 86 28 -37.4 5' arm      3' arm
8572 - 120230 85 28 -36.6 5' arm      3' arm
8563 - 75580 85 27.5 -35.8 NP_037836 5' arm      3' arm
8538 - 11253 88 27 -28.8 5' arm      3' arm
8500 + 42250 89 27 -20.7 5' arm      3' arm
8512 + 105045 89 27 -35.1 5' arm      3' arm
8552 - 42115 90 27 -36.3 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.