miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
28524	-	62196	80	19	-24.7	YP_031633		5' arm      3' arm
28341	+	7987	90	19	-26.8	YP_031586		5' arm      3' arm
28343	+	8996	79	19	-26.5	YP_031586		5' arm      3' arm
28384	+	47123	89	19	-27.1	YP_031619		5' arm      3' arm
28539	-	74613	85	19	-21.4			5' arm      3' arm
28401	+	62077	88	19	-34.2	YP_031633		5' arm      3' arm
28565	-	102217	89	19	-23.4	YP_031674		5' arm      3' arm
28399	+	60896	86	19	-27.8			5' arm      3' arm
28388	+	50783	89	19	-22.1	YP_031620		5' arm      3' arm
28521	-	60961	89	19	-20.1			5' arm      3' arm
28431	+	83066	80	19	-27.2	YP_031653		5' arm      3' arm
28442	+	93847	90	19	-20.3	YP_031666		5' arm      3' arm
28515	-	55875	90	19	-23	YP_031629		5' arm      3' arm
28386	+	48608	90	19	-23.2	YP_031619		5' arm      3' arm
28561	-	99397	87	19	-22.5	YP_031670		5' arm      3' arm
28513	-	53280	87	19	-23.1	YP_031625		5' arm      3' arm
28339	+	4110	85	19	-25.9	YP_031581		5' arm      3' arm
28512	-	52322	88	19	-31.1	YP_031623		5' arm      3' arm
28523	-	62073	73	19	-30.3	YP_031634		5' arm      3' arm
28350	+	13138	90	19	-19.71	YP_031587		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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