miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
765	+	293908	90	28	-22	NP_048971		5' arm      3' arm
788	-	323990	90	28	-22.3	NP_049037		5' arm      3' arm
759	+	208294	90	27	-22.6	NP_048785		5' arm      3' arm
781	-	218593	90	26.5	-23.9			5' arm      3' arm
780	-	197739	88	25.5	-21.5	NP_048762		5' arm      3' arm
760	+	208393	90	25	-26.8	NP_048785		5' arm      3' arm
782	-	244968	90	25	-22.3			5' arm      3' arm
783	-	257560	87	24	-23.5	NP_048896		5' arm      3' arm
774	-	102985	90	24	-21.7	NP_048546		5' arm      3' arm
755	+	142304	88	23	-23.4	NP_048632		5' arm      3' arm
758	+	174871	90	22.5	-28.8	NP_048709		5' arm      3' arm
761	+	210503	88	22	-26.4	NP_048787		5' arm      3' arm
762	+	210719	89	21.5	-25.2	NP_048787		5' arm      3' arm
770	+	328100	90	21.5	-22			5' arm      3' arm
787	-	320367	89	21.5	-21.4	NP_049022		5' arm      3' arm
786	-	310266	89	21	-20	NP_048999		5' arm      3' arm
785	-	286075	90	21	-29.6	NP_048949		5' arm      3' arm
772	-	33479	90	20.5	-24.32	NP_048408		5' arm      3' arm
763	+	260440	88	20.5	-19.8	NP_048896		5' arm      3' arm
779	-	179257	90	20	-24.9	NP_048720		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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