miRNA display CGI


Results 1 - 20 of 120 are showing below:
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GenBank Identifier RefSeq Acc. Name
24943089 NC_004367.1 Callitrichine herpesvirus 3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
17290 + 115499 89 24 -27.8 5' arm      3' arm
17282 + 69578 85 19.5 -20 NP_733892 5' arm      3' arm
17283 + 76612 90 23 -21.5 NP_733898 5' arm      3' arm
17284 + 81507 90 24.5 -20.1 NP_733900 5' arm      3' arm
17285 + 81673 89 23.5 -27.2 NP_733900 5' arm      3' arm
17286 + 85200 88 19 -21.9 NP_733904 5' arm      3' arm
17288 + 88426 89 21.5 -28.4 5' arm      3' arm
17287 + 86578 90 21 -22.9 NP_733904 5' arm      3' arm
17289 + 109095 90 21.5 -20.1 NP_733914 5' arm      3' arm
17281 + 56735 89 19.5 -25.9 5' arm      3' arm
17280 + 53350 90 19 -27.6 NP_733880 5' arm      3' arm
17279 + 51555 90 21.5 -26 NP_733878 5' arm      3' arm
17271 + 16550 86 20.5 -26 5' arm      3' arm
17273 + 22248 90 21 -31.2 5' arm      3' arm
17272 + 20614 89 19 -24.3 NP_733860 5' arm      3' arm
17274 + 23092 90 23 -20.5 5' arm      3' arm
17275 + 26311 89 19.5 -23.4 NP_733862 5' arm      3' arm
17276 + 37775 77 19.5 -26.1 NP_733869 5' arm      3' arm
17278 + 40852 89 19.5 -21.82 NP_733870 5' arm      3' arm
17277 + 39912 88 19 -30 NP_733870 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.