miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27284	+	102	89	22.5	-29.6			5' arm      3' arm
27285	+	8197	85	19	-22.2			5' arm      3' arm
27286	+	8312	90	24	-21.9			5' arm      3' arm
27287	+	10101	85	20.5	-22.56	YP_006478		5' arm      3' arm
27288	+	11267	90	20.5	-21	YP_006479		5' arm      3' arm
27289	+	15292	89	21	-20.4	YP_006479		5' arm      3' arm
27290	+	17499	86	22	-19.7	YP_006480		5' arm      3' arm
27291	+	17738	89	21.5	-24.5	YP_006480		5' arm      3' arm
27292	+	31838	87	21.5	-19.4	YP_006499		5' arm      3' arm
27293	+	32595	88	22.5	-20.1	YP_006502		5' arm      3' arm
27294	+	33598	90	20.5	-20.3			5' arm      3' arm
27295	+	34144	90	22.5	-19.8	YP_006500		5' arm      3' arm
27296	+	34297	88	19	-26.8			5' arm      3' arm
27297	+	36373	89	21.5	-24.9	YP_006502		5' arm      3' arm
27298	+	48283	86	19.5	-24.9			5' arm      3' arm
27299	+	48710	88	21	-22	YP_006515		5' arm      3' arm
27300	+	48802	89	22	-22.3	YP_006515		5' arm      3' arm
27301	+	50599	90	20.5	-25.8	YP_006517		5' arm      3' arm
27302	+	57773	88	19	-20.7	YP_006526		5' arm      3' arm
27303	+	62808	88	20.5	-26.6			5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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