miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
27304	+	68191	87	25.5	-20.4	YP_006537		5' arm      3' arm
27305	+	69060	89	25	-23.5			5' arm      3' arm
27306	+	70699	90	22	-22.4	YP_006541		5' arm      3' arm
27307	+	74145	89	21	-21.9	YP_006545		5' arm      3' arm
27308	+	79641	85	22.5	-25	YP_006554		5' arm      3' arm
27309	+	90952	89	21.5	-22.2	YP_006575		5' arm      3' arm
27310	+	92589	89	22	-22.1	YP_006576		5' arm      3' arm
27311	+	94080	89	22.5	-28.3			5' arm      3' arm
27312	+	94215	88	23.5	-19.4	YP_006578		5' arm      3' arm
27313	-	2378	90	20	-34.5	YP_006474		5' arm      3' arm
27314	-	9693	89	21	-22			5' arm      3' arm
27315	-	11639	90	19.5	-20.7	YP_006479		5' arm      3' arm
27316	-	18808	90	24	-22.5	YP_006480		5' arm      3' arm
27317	-	22771	88	20	-20.5	YP_006487		5' arm      3' arm
27318	-	26330	83	20	-21.4	YP_006491		5' arm      3' arm
27319	-	30683	88	22	-23.7	YP_006496		5' arm      3' arm
27320	-	30865	64	21	-26.5	YP_006496		5' arm      3' arm
27321	-	31213	90	19.5	-22.4	YP_006497		5' arm      3' arm
27322	-	32332	89	21.5	-24.9	YP_006502		5' arm      3' arm
27323	-	34233	90	22	-20	YP_006500		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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