Results 1 - 20 of 48 are showing below:
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GenBank Identifier | RefSeq Acc. | Name |
46401626 | NC_005856.1 | Enterobacteria phage P1 virion |
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ID | strand | start position | length | sRNA loop score |
core MFE.![]() |
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
27330 | - | 82563 | 87 | 22 | -37.4 | YP_006559 | 5' arm 3' arm | ||
27313 | - | 2378 | 90 | 20 | -34.5 | YP_006474 | 5' arm 3' arm | ||
27331 | - | 94168 | 89 | 24.5 | -32 | 5' arm 3' arm | |||
27284 | + | 102 | 89 | 22.5 | -29.6 | 5' arm 3' arm | |||
27311 | + | 94080 | 89 | 22.5 | -28.3 | 5' arm 3' arm | |||
27328 | - | 54614 | 90 | 21 | -27.4 | 5' arm 3' arm | |||
27296 | + | 34297 | 88 | 19 | -26.8 | 5' arm 3' arm | |||
27303 | + | 62808 | 88 | 20.5 | -26.6 | 5' arm 3' arm | |||
27320 | - | 30865 | 64 | 21 | -26.5 | YP_006496 | 5' arm 3' arm | ||
27324 | - | 34375 | 88 | 20 | -25.9 | 5' arm 3' arm | |||
27301 | + | 50599 | 90 | 20.5 | -25.8 | YP_006517 | 5' arm 3' arm | ||
27308 | + | 79641 | 85 | 22.5 | -25 | YP_006554 | 5' arm 3' arm | ||
27297 | + | 36373 | 89 | 21.5 | -24.9 | YP_006502 | 5' arm 3' arm | ||
27298 | + | 48283 | 86 | 19.5 | -24.9 | 5' arm 3' arm | |||
27322 | - | 32332 | 89 | 21.5 | -24.9 | YP_006502 | 5' arm 3' arm | ||
27291 | + | 17738 | 89 | 21.5 | -24.5 | YP_006480 | 5' arm 3' arm | ||
27319 | - | 30683 | 88 | 22 | -23.7 | YP_006496 | 5' arm 3' arm | ||
27305 | + | 69060 | 89 | 25 | -23.5 | 5' arm 3' arm | |||
27326 | - | 40848 | 86 | 25 | -22.9 | YP_006506 | 5' arm 3' arm | ||
27287 | + | 10101 | 85 | 20.5 | -22.56 | YP_006478 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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