miRNA display CGI


Results 1 - 20 of 48 are showing below:
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GenBank Identifier RefSeq Acc. Name
46401626 NC_005856.1 Enterobacteria phage P1 virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
27330 - 82563 87 22 -37.4 YP_006559 5' arm      3' arm
27313 - 2378 90 20 -34.5 YP_006474 5' arm      3' arm
27331 - 94168 89 24.5 -32 5' arm      3' arm
27284 + 102 89 22.5 -29.6 5' arm      3' arm
27311 + 94080 89 22.5 -28.3 5' arm      3' arm
27328 - 54614 90 21 -27.4 5' arm      3' arm
27296 + 34297 88 19 -26.8 5' arm      3' arm
27303 + 62808 88 20.5 -26.6 5' arm      3' arm
27320 - 30865 64 21 -26.5 YP_006496 5' arm      3' arm
27324 - 34375 88 20 -25.9 5' arm      3' arm
27301 + 50599 90 20.5 -25.8 YP_006517 5' arm      3' arm
27308 + 79641 85 22.5 -25 YP_006554 5' arm      3' arm
27297 + 36373 89 21.5 -24.9 YP_006502 5' arm      3' arm
27298 + 48283 86 19.5 -24.9 5' arm      3' arm
27322 - 32332 89 21.5 -24.9 YP_006502 5' arm      3' arm
27291 + 17738 89 21.5 -24.5 YP_006480 5' arm      3' arm
27319 - 30683 88 22 -23.7 YP_006496 5' arm      3' arm
27305 + 69060 89 25 -23.5 5' arm      3' arm
27326 - 40848 86 25 -22.9 YP_006506 5' arm      3' arm
27287 + 10101 85 20.5 -22.56 YP_006478 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.