miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
23077	-	3313	89	20.5	-22.7	NP_938213		5' arm      3' arm
23073	-	1631	84	20.5	-23.7	NP_938210		5' arm      3' arm
23059	+	31980	89	20.5	-22	NP_938256		5' arm      3' arm
23076	-	3204	88	20.5	-25.2	NP_938213		5' arm      3' arm
23087	-	5994	90	20.5	-20.6	NP_938215		5' arm      3' arm
23048	+	25144	90	20.5	-23.9	NP_938250		5' arm      3' arm
23047	+	24967	87	20.5	-23.4	NP_938249		5' arm      3' arm
23127	-	19884	89	20.5	-27.1			5' arm      3' arm
23088	-	6216	84	21	-30.3	NP_938216		5' arm      3' arm
23062	+	32709	90	21	-25.4	NP_938257		5' arm      3' arm
23063	+	32927	85	21	-24.9	NP_938257		5' arm      3' arm
23116	-	16796	90	21	-26.1	NP_938234		5' arm      3' arm
23137	-	22720	90	21	-22.4	NP_938244		5' arm      3' arm
23061	+	32404	90	21	-24.3			5' arm      3' arm
23117	-	16908	90	21	-30	NP_938234		5' arm      3' arm
23089	-	6497	90	21	-22.2	NP_938216		5' arm      3' arm
23035	+	15411	75	21	-24.1			5' arm      3' arm
23049	+	25848	88	21	-24.9	NP_938251		5' arm      3' arm
23032	+	12924	90	21	-28.7	NP_938231		5' arm      3' arm
23105	-	12337	86	21	-22	NP_938229		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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