miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8072	+	1506	88	20.5	-19.8	NP_047924		5' arm      3' arm
8073	+	1694	89	22	-30.4	NP_047924		5' arm      3' arm
8074	+	3125	90	22.5	-20.2	NP_047925		5' arm      3' arm
8075	+	4574	90	22.5	-29.2			5' arm      3' arm
8076	+	5260	89	19.5	-23.1	NP_047927		5' arm      3' arm
8077	+	5901	90	20	-25	NP_047927		5' arm      3' arm
8078	+	6299	90	21	-25.7	NP_047928		5' arm      3' arm
8079	+	6523	90	22.5	-27.7	NP_047929		5' arm      3' arm
8080	+	6755	85	23.5	-19.7	NP_047929		5' arm      3' arm
8081	+	7049	89	21.5	-27.6	NP_047930		5' arm      3' arm
8082	+	7382	86	21.5	-20.1	NP_047930		5' arm      3' arm
8083	+	7519	87	19.5	-28.2	NP_047930		5' arm      3' arm
8084	+	7880	90	19.5	-25.7	NP_047930		5' arm      3' arm
8085	+	7973	89	21	-22.7	NP_047931		5' arm      3' arm
8086	+	8681	79	23.5	-37.1	NP_047932		5' arm      3' arm
8087	+	9045	88	22.5	-25.2	NP_047934		5' arm      3' arm
8088	+	9351	90	20	-19.9	NP_047934		5' arm      3' arm
8089	+	9465	90	21.5	-23.1	NP_047934		5' arm      3' arm
8090	+	10213	81	23	-21.3	NP_047934		5' arm      3' arm
8091	+	11562	90	21	-28.3	NP_047935		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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