miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8092	+	12247	90	21	-21.4	NP_047936		5' arm      3' arm
8093	+	12860	84	24	-32	NP_047936		5' arm      3' arm
8094	+	13535	90	21.5	-20.4	NP_047937		5' arm      3' arm
8095	+	14049	90	21.5	-24.9	NP_047938		5' arm      3' arm
8096	+	14529	89	19	-24.9	NP_047938		5' arm      3' arm
8097	+	14740	88	20.5	-26.21	NP_047938		5' arm      3' arm
8098	+	15004	90	21	-23.7	NP_047939		5' arm      3' arm
8099	+	16691	89	22	-24.5	NP_047940		5' arm      3' arm
8100	+	17301	89	23	-29	NP_047941		5' arm      3' arm
8101	+	17812	88	19	-23.7	NP_047941		5' arm      3' arm
8102	+	17943	90	19.5	-22.5	NP_047941		5' arm      3' arm
8103	+	18600	89	20.5	-21.6	NP_047943		5' arm      3' arm
8104	+	19157	89	20.5	-21.4			5' arm      3' arm
8105	+	19347	90	21	-24.5	NP_047944		5' arm      3' arm
8106	+	19700	90	20	-20.5	NP_047944		5' arm      3' arm
8107	+	19868	87	21.5	-27.7	NP_047944		5' arm      3' arm
8108	+	21204	88	19	-20.8	NP_047944		5' arm      3' arm
8109	+	21618	79	22	-20.1			5' arm      3' arm
8110	+	21939	90	19.5	-24.7	NP_047946		5' arm      3' arm
8111	+	22201	89	24	-29.5	NP_047946		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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