miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8157	-	5306	89	19.5	-29.8	NP_047927		5' arm      3' arm
8151	+	39243	87	19	-29.6	NP_047974		5' arm      3' arm
8153	+	40886	90	20.5	-29.6	NP_047975		5' arm      3' arm
8111	+	22201	89	24	-29.5	NP_047946		5' arm      3' arm
8075	+	4574	90	22.5	-29.2			5' arm      3' arm
8112	+	22321	89	19.5	-29.2	NP_047946		5' arm      3' arm
8190	-	22409	89	21.5	-29	NP_047946		5' arm      3' arm
8100	+	17301	89	23	-29	NP_047941		5' arm      3' arm
8142	+	35268	90	20	-28.9	NP_047967		5' arm      3' arm
8187	-	21652	90	22	-28.5			5' arm      3' arm
8155	-	853	89	24	-28.4	NP_047923		5' arm      3' arm
8091	+	11562	90	21	-28.3	NP_047935		5' arm      3' arm
8083	+	7519	87	19.5	-28.2	NP_047930		5' arm      3' arm
8079	+	6523	90	22.5	-27.7	NP_047929		5' arm      3' arm
8107	+	19868	87	21.5	-27.7	NP_047944		5' arm      3' arm
8081	+	7049	89	21.5	-27.6	NP_047930		5' arm      3' arm
8176	-	16442	90	21.5	-27.2	NP_047940		5' arm      3' arm
8150	+	38848	90	21	-27	NP_047974		5' arm      3' arm
8174	-	15555	86	19	-27	NP_047940		5' arm      3' arm
8129	+	27136	90	22.5	-27	NP_047955		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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