miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8194	-	23600	89	22	-23.2	NP_047948		5' arm      3' arm
8187	-	21652	90	22	-28.5			5' arm      3' arm
8099	+	16691	89	22	-24.5	NP_047940		5' arm      3' arm
8124	+	26120	89	22	-23	NP_047955		5' arm      3' arm
8081	+	7049	89	21.5	-27.6	NP_047930		5' arm      3' arm
8220	-	39074	87	21.5	-21.9	NP_047974		5' arm      3' arm
8218	-	38698	90	21.5	-22.6	NP_047974		5' arm      3' arm
8176	-	16442	90	21.5	-27.2	NP_047940		5' arm      3' arm
8082	+	7382	86	21.5	-20.1	NP_047930		5' arm      3' arm
8182	-	19624	89	21.5	-22.1	NP_047944		5' arm      3' arm
8095	+	14049	90	21.5	-24.9	NP_047938		5' arm      3' arm
8204	-	30582	87	21.5	-23.9	NP_047957		5' arm      3' arm
8169	-	11030	87	21.5	-20.7	NP_047934		5' arm      3' arm
8094	+	13535	90	21.5	-20.4	NP_047937		5' arm      3' arm
8222	-	40016	88	21.5	-25.6	NP_047974		5' arm      3' arm
8206	-	32403	89	21.5	-24.7			5' arm      3' arm
8175	-	16324	90	21.5	-20.7	NP_047940		5' arm      3' arm
8190	-	22409	89	21.5	-29	NP_047946		5' arm      3' arm
8120	+	25216	88	21.5	-22.1	NP_047955		5' arm      3' arm
8115	+	23829	90	21.5	-31.7	NP_047949		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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