miRNA display CGI


Results 41 - 60 of 154 are showing below:
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GenBank Identifier RefSeq Acc. Name
40807285 NC_001978.2 Bacteriophage phi-C31

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8126 + 26477 90 20 -22.7 NP_047955 5' arm      3' arm
8128 + 26853 87 20 -21.3 NP_047955 5' arm      3' arm
8148 + 37850 89 20 -33.5 NP_047972 5' arm      3' arm
8178 - 16777 89 20 -26.3 NP_047940 5' arm      3' arm
8205 - 31707 89 20 -20.9 NP_047959 5' arm      3' arm
8142 + 35268 90 20 -28.9 NP_047967 5' arm      3' arm
8163 - 7475 90 20 -22.5 NP_047930 5' arm      3' arm
8145 + 36426 89 20 -20.9 NP_047970 5' arm      3' arm
8139 + 33795 88 20 -22.1 NP_047964 5' arm      3' arm
8202 - 30063 90 20 -22.2 NP_047957 5' arm      3' arm
8077 + 5901 90 20 -25 NP_047927 5' arm      3' arm
8088 + 9351 90 20 -19.9 NP_047934 5' arm      3' arm
8133 + 29879 88 20 -30.2 5' arm      3' arm
8154 + 41087 88 20 -19.4 NP_047976 5' arm      3' arm
8162 - 6969 89 20 -22.2 NP_047929 5' arm      3' arm
8179 - 17726 90 20 -24.2 NP_047941 5' arm      3' arm
8156 - 1928 83 20 -22.1 NP_047924 5' arm      3' arm
8106 + 19700 90 20 -20.5 NP_047944 5' arm      3' arm
8121 + 25536 89 20.5 -22 NP_047955 5' arm      3' arm
8097 + 14740 88 20.5 -26.21 NP_047938 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.