miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
8195	-	24961	82	20.5	-25.4	NP_047953		5' arm      3' arm
8072	+	1506	88	20.5	-19.8	NP_047924		5' arm      3' arm
8104	+	19157	89	20.5	-21.4			5' arm      3' arm
8121	+	25536	89	20.5	-22	NP_047955		5' arm      3' arm
8132	+	29229	89	20.5	-25.7	NP_047956		5' arm      3' arm
8103	+	18600	89	20.5	-21.6	NP_047943		5' arm      3' arm
8217	-	37843	90	20.5	-26	NP_047972		5' arm      3' arm
8153	+	40886	90	20.5	-29.6	NP_047975		5' arm      3' arm
8097	+	14740	88	20.5	-26.21	NP_047938		5' arm      3' arm
8141	+	35178	89	20.5	-24.7	NP_047967		5' arm      3' arm
8098	+	15004	90	21	-23.7	NP_047939		5' arm      3' arm
8168	-	10875	87	21	-22.3	NP_047934		5' arm      3' arm
8122	+	25703	90	21	-20.2	NP_047955		5' arm      3' arm
8117	+	24288	90	21	-36			5' arm      3' arm
8078	+	6299	90	21	-25.7	NP_047928		5' arm      3' arm
8135	+	30928	90	21	-32.1	NP_047957		5' arm      3' arm
8085	+	7973	89	21	-22.7	NP_047931		5' arm      3' arm
8091	+	11562	90	21	-28.3	NP_047935		5' arm      3' arm
8215	-	36237	89	21	-26.9	NP_047968		5' arm      3' arm
8092	+	12247	90	21	-21.4	NP_047936		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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