miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1025	+	51115	82	19	-20.8	NP_049532		5' arm      3' arm
1023	+	49438	86	21	-22.2	NP_049532		5' arm      3' arm
1026	+	51285	88	19.5	-21.3	NP_049532		5' arm      3' arm
1024	+	50008	82	20	-22	NP_049532		5' arm      3' arm
1050	-	51716	87	21.5	-25	NP_049532		5' arm      3' arm
1048	-	50472	88	23	-30.7	NP_049532		5' arm      3' arm
1049	-	51467	89	19	-20.52	NP_049532		5' arm      3' arm
1027	+	52128	88	23	-24.5	NP_049532		5' arm      3' arm
1051	-	55034	90	23	-19.6	NP_049532		5' arm      3' arm
1028	+	56199	86	20.5	-31.6	NP_049532		5' arm      3' arm
1030	+	56616	89	28.5	-19.6	NP_049532		5' arm      3' arm
1029	+	56397	90	23.5	-28.2	NP_049532		5' arm      3' arm
1022	+	47608	84	23.5	-23.6	NP_049530		5' arm      3' arm
1021	+	46818	89	20	-23.4	NP_049528		5' arm      3' arm
1018	+	42527	90	21	-20.6	NP_049523		5' arm      3' arm
1019	+	42892	90	19.5	-21.5	NP_049523		5' arm      3' arm
1017	+	40995	89	20.5	-21.2	NP_049522		5' arm      3' arm
1047	-	41566	89	23.5	-29.31	NP_049522		5' arm      3' arm
1046	-	39157	88	19.5	-21	NP_049519		5' arm      3' arm
1016	+	38160	87	22	-26	NP_049519		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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